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Notes on Kalydeco, the New Cystic Fibrosis Drug

I thought it worth­while to learn a bit about Kalydeco, the new drug for cystic fibrosis. It’s the first “smart” med­ication approved by the FDA for some patients with this con­dition. According to Busi­nessweek and other sources, the annual cost of this oral treatment, man­u­fac­tured by Vertex phar­ma­ceu­ticals, will be nearly $300,000.

Cystic fibrosis is an inherited disease that affects the lungs, sweat glands and, in males, the vas def­erens — the tube that carries sperm from the testes. Patients are prone to infection (espe­cially pneu­monia), over­heating, infer­tility and other problems. Most symptoms arise from defects in transport of ions, like chloride, through mem­branes. Cystic fibrosis is often dis­abling and, typ­i­cally, life-​​shortening. In 1989, Francis Collins and Lap-​​Chee Tsu reported in Science they’d dis­covered the gene responsible.

Location on CFTR gene on human chro­mosome 7

Now, there’s a wealth of infor­mation about the Cystic Fibrosis Trans­mem­brane Reg­u­lator (CFTR) gene. It’s located on human chro­mosome 7 at q (long arm) 31.2, and encodes an ABC (ATP-​​binding cas­sette) type ion trans­porter protein. According to an analysis in Nature this week, sci­en­tists have iden­tified over 1500 CFTR mutations.

Kalydeco goes by the generic ‘iva­caftor’ and has been tested pub­lished reports as ‘VX08-770–102.’ This com­pound targets the defect caused by one mutation, termed G551D. Only 4% of cystic fibrosis patients have this genetic variant. Over 90% have a dif­ferent mutation, F508del. These dis­tinct muta­tions alter the protein dis­tinctly. From Nature News:

… In patients with the G551D mutation, the channel fails to open properly, so ions are un­able to pass through. About 90% of people with cystic fibrosis have a dif­ferent mutation, called F508del, which results in pro­teins that do not fold into their proper shape and so get tar­geted for degra­dation, reducing the number of channels…

Drugs in the pipeline will target the more common F508del mutation. Mean­while, it’s easy to envision more than a few eager parents, patients and opti­mistic pedi­a­tri­cians wanting to pre­scribe the new drug for their cystic fibrosis patients who don’t have the G551D mutation. The number of people living with cystic fibrosis in the U.S. is 30,000, according to the Cystic Fibrosis Foun­dation, so the FDA’s approval applies to approx­i­mately 1,200 indi­viduals — the 4% — who carry the G551D mutation.

This seems a perfect example of a new, expensive drug that may really help just a few people, and for which there’s a clear genetic marker. Now, if we could only assume the assay for the mutation will be done cor­rectly in each case…

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