leave a comment

On Juno and Screening Test Stats

——–
“Well, well” says the con­ve­nience store clerk. “Back for another test?”

“I think the first one was defective. The plus sign looks more like a division symbol, so I remain uncon­vinced,” states Juno the pregnant teenager.

“Third test today, mama-​​bear,” notes the clerk.

Juno recluses herself and uses a do-​​it-​​yourself preg­nancy test in the restroom, on film.

“What’s the prog­nosis … minus or plus?” asks the clerk.

…“There it is. The little pink plus sign is so unholy,” Juno responds.

She’s pregnant, clearly, and she knows she is.

(from Juno the movie*)
——-

Juno\‘s preg­nancy test
——-
Think of how a sta­tis­tician might con­sider Juno’s predicament — when a testing device is useful but some­times gives an unclear or wrong signal.

Sci­en­tists use two terms — sen­si­tivity and speci­ficity – among others, to assess the accuracy of diag­nostic tests. In general, these terms work best for tests that provide binary sorts of out­comes — “yes” or “no” type sit­u­a­tions. Sen­si­tivity refers to how well a screening tool detects a con­dition that’s really present (preg­nancy, in the teenager’s case). Speci­ficity, by con­trast, mea­sures how well a test reports results that are truly negative.**

Juno’s readout is rel­a­tively straight­forward – a pink plus sign or, not; the pos­si­bil­ities regarding her true con­dition are few.

Still, even the sim­plest of diag­nostic tests can go wrong. Errors can arise from mis­takes in the pro­cedure (a clut­tered, dirty store is hardly an ideal lab envi­ronment), from flawed reagents (the package might be old, with paper that doesn’t turn vividly pink in case of preg­nancy) or from mis­reading results (perhaps Juno needs glasses).

Why does this matter, now?

The medical and political news are dense with sta­tistics on mam­mo­grams; getting a handle on the costs of cancer screening requires more infor­mation than most of us have at our disposal.

Of course, breast cancer is not like preg­nancy. Among other dis­tin­guishing fea­tures, it’s not a binary con­dition; you can’t be a little bit pregnant.  (Both are com­pli­cated, I know.)

To get to the bottom of the screening issue, we’ll have to delve deeper, still.

——-
*Thanks Juno, Dwight and everyone else involved in the 2007 film; details listed on IMBD.

———

**I was sur­prised to find few acces­sible on-​​line resources on stats. For those who’d like to under­stand more on the matter of sen­si­tivity and speci­ficity, I rec­ommend starting with a 2003 article by Tze-​​Wey Loong in the British Medical Journal. This journal, with a stated mission to “help doctors to make better deci­sions” pro­vides open, free access to anyone who reg­isters on-​​line.

I’ll offer an example here, too:

To measure the accuracy of Juno’s kit, a sta­tis­tician might visit a com­munity of 100 pos­sibly pregnant women who used the same type of device. If 20 of the women are indeed pregnant (as con­firmed by another test, like a sonogram), but only 16 of those see the pink plus sign, the sen­si­tivity of the test would be 16/​20, or 80 percent. And if, among the 80 women who aren’t due, 76 get neg­ative results, the speci­ficity would be 76/​80, or 95 percent.

False neg­a­tives: among the 20 pregnant women 4 find neg­ative results; the false neg­ative rate (FN) is 4/​20, or 20 percent.

False pos­i­tives: among the 80 women who aren’t pregnant 4 see mis­leading traces of pink; the false pos­itive (FP) rate is 4/​80, or 5 percent.

Related Posts:

Leave a Reply